BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016C02SP1|AL426972
(916 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1307 1785 0.0
>3x_Contig1307
Length = 7280
Score = 1785 bits (900), Expect = 0.0
Identities = 903/905 (99%)
Strand = Plus / Minus
Query: 12 atctgccaaaaataagcaaagaagaacttcaagaacagaaaccagtactatcaataaaga 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6666 atctgccaaaaataagcaaagaagaacttcaagaacagaaaccagtactatcaataaaga 6607
Query: 72 cgtttgacattaagaagtgcatcaatgttaataacttttcaagtgatgcttcgatgatat 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6606 cgtttgacattaagaagtgcatcaatgttaataacttttcaagtgatgcttcgatgatat 6547
Query: 132 attgttttaaaattttaatggaaaatggaaacgaacatctaatccaaacgattgactccc 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6546 attgttttaaaattttaatggaaaatggaaacgaacatctaatccaaacgattgactccc 6487
Query: 192 atgacttaagtcagtggctaaagacgatagcgctatccaaacgctattctttccactcta 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6486 atgacttaagtcagtggctaaagacgatagcgctatccaaacgctattctttccactcta 6427
Query: 252 agaaatacaaaggtaaaacctctaacaaagtattcggtgttcccatcgaagacatatgtg 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6426 agaaatacaaaggtaaaacctctaacaaagtattcggtgttcccatcgaagacatatgtg 6367
Query: 312 aaagagagggcactctcacaccgactattgttcataagcttctagaagaaattgagcttc 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6366 aaagagagggcactctcacaccgactattgttcataagcttctagaagaaattgagcttc 6307
Query: 372 gcgncctagatgaagttggtctatatcgggtgccgggttcagttggtagcattaatctac 431
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6306 gcggcctagatgaagttggtctatatcgggtgccgggttcagttggtagcattaatctac 6247
Query: 432 tgaaaaatgcctttgacgatgagggcgcagtgcacaatgtctttacactagaagatgacc 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6246 tgaaaaatgcctttgacgatgagggcgcagtgcacaatgtctttacactagaagatgacc 6187
Query: 492 ggtggtttgagataaacactattgctggttgtttcaagctttacctgagggaattgcctg 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6186 ggtggtttgagataaacactattgctggttgtttcaagctttacctgagggaattgcctg 6127
Query: 552 agtccttgttcacaaacgagaagttaccagatttcatccagcttgttgaacaatttcaga 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6126 agtccttgttcacaaacgagaagttaccagatttcatccagcttgttgaacaatttcaga 6067
Query: 612 cggaccagattacggaagaggcttttgacgagttggtcaggcagaagcttagaactttac 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6066 cggaccagattacggaagaggcttttgacgagttggtcaggcagaagcttagaactttac 6007
Query: 672 caatatacaattaccacatgataaagaggatcttccagcatctacacagagttcataatc 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6006 caatatacaattaccacatgataaagaggatcttccagcatctacacagagttcataatc 5947
Query: 732 atatggataccaaccgtatggatgctagcaatcttgctattgttttctcaatgagtttca 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5946 atatggataccaaccgtatggatgctagcaatcttgctattgttttctcaatgagtttca 5887
Query: 792 tcaatcaagatgatctggctaacagtatgggaccaagtttaggtttattgcagagcctac 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5886 tcaatcaagatgatctggctaacagtatgggaccaagtttaggtttattgcagagcctac 5827
Query: 852 tgcaaaagttcataagatatccagatacctatttcgtctatgaatagactataataatat 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5826 tgcaaaagttcataagatatccagatacctatttcgtctatgaatagactataataatat 5767
Query: 912 atwat 916
|| ||
Sbjct: 5766 ataat 5762
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6797
Number of Sequences: 1807
Number of extensions: 6797
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 916
length of database: 10,358,551
effective HSP length: 16
effective length of query: 900
effective length of database: 10,329,639
effective search space: 9296675100
effective search space used: 9296675100
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)